dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01098
Location and strand information: 51346 - 53793 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3231
Protein molecular weight: 90695.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01099
Location and strand information: 53821 - 55416 (-)
Family: GH43_35
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 5.7231
Protein molecular weight: 58920.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01100
Location and strand information: 55488 - 56000 (-)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01101
Location and strand information: 56325 - 57941 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01102
Location and strand information: 57999 - 59591 (-)
Family: CBM32|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8282
Protein molecular weight: 59423.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01103
Location and strand information: 59656 - 61965 (-)
Family: GH154|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0779
Protein molecular weight: 88566.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01104
Location and strand information: 62037 - 62498 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01105
Location and strand information: 62467 - 66168 (-)
Family: Reg_prop+Reg_prop+Y_Y_Y+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003035_14|CGC1
Gene ID: MGYG000003035_01106
Location and strand information: 66765 - 70055 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003035_01098	hypothetical protein	CAZyme	51346	53793	-	GH95
MGYG000003035_01099	Xylosidase/arabinosidase	CAZyme	53821	55416	-	GH43_35
MGYG000003035_01100	hypothetical protein	STP	55488	56000	-	Sigma70_r2\| Sigma70_r4_2
MGYG000003035_01101	hypothetical protein	null	56325	57941	+	SASA\| SASA
MGYG000003035_01102	hypothetical protein	CAZyme	57999	59591	-	CBM32\| GH43_24
MGYG000003035_01103	hypothetical protein	CAZyme	59656	61965	-	GH154\| GH105
MGYG000003035_01104	HTH-type transcriptional activator RhaS	TF	62037	62498	-	HTH_AraC+HTH_AraC
MGYG000003035_01105	Sensor histidine kinase RcsC	STP	62467	66168	-	Reg_prop\| Reg_prop\| Y_Y_Y\| HisKA\| HATPase_c\| Response_reg
MGYG000003035_01106	TonB-dependent receptor SusC	TC	66765	70055	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature